Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.
Identifieur interne : 002311 ( Main/Exploration ); précédent : 002310; suivant : 002312Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.
Auteurs : Jack P. Wang [République populaire de Chine] ; Punith P. Naik ; Hsi-Chuan Chen ; Rui Shi ; Chien-Yuan Lin ; Jie Liu ; Christopher M. Shuford ; Quanzi Li ; Ying-Hsuan Sun ; Sermsawat Tunlaya-Anukit ; Cranos M. Williams ; David C. Muddiman ; Joel J. Ducoste ; Ronald R. Sederoff ; Vincent L. ChiangSource :
- The Plant cell [ 1532-298X ] ; 2014.
Descripteurs français
- KwdFr :
- MESH :
- métabolisme : Lignine, Populus, Protéines végétales.
- Cinétique, Polymorphisme de nucléotide simple, Protéome, Spectrométrie de masse.
English descriptors
- KwdEn :
- MESH :
- chemical , metabolism : Lignin, Plant Proteins.
- metabolism : Populus.
- Kinetics, Mass Spectrometry, Polymorphism, Single Nucleotide, Proteome.
Abstract
We established a predictive kinetic metabolic-flux model for the 21 enzymes and 24 metabolites of the monolignol biosynthetic pathway using Populus trichocarpa secondary differentiating xylem. To establish this model, a comprehensive study was performed to obtain the reaction and inhibition kinetic parameters of all 21 enzymes based on functional recombinant proteins. A total of 104 Michaelis-Menten kinetic parameters and 85 inhibition kinetic parameters were derived from these enzymes. Through mass spectrometry, we obtained the absolute quantities of all 21 pathway enzymes in the secondary differentiating xylem. This extensive experimental data set, generated from a single tissue specialized in wood formation, was used to construct the predictive kinetic metabolic-flux model to provide a comprehensive mathematical description of the monolignol biosynthetic pathway. The model was validated using experimental data from transgenic P. trichocarpa plants. The model predicts how pathway enzymes affect lignin content and composition, explains a long-standing paradox regarding the regulation of monolignol subunit ratios in lignin, and reveals novel mechanisms involved in the regulation of lignin biosynthesis. This model provides an explanation of the effects of genetic and transgenic perturbations of the monolignol biosynthetic pathway in flowering plants.
DOI: 10.1105/tpc.113.120881
PubMed: 24619611
PubMed Central: PMC4001400
Affiliations:
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Wang</name><affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040</wicri:regionArea><wicri:noRegion>Harbin 150040</wicri:noRegion></affiliation></author><author><name sortKey="Naik, Punith P" sort="Naik, Punith P" uniqKey="Naik P" first="Punith P" last="Naik">Punith P. Naik</name></author><author><name sortKey="Chen, Hsi Chuan" sort="Chen, Hsi Chuan" uniqKey="Chen H" first="Hsi-Chuan" last="Chen">Hsi-Chuan Chen</name></author><author><name sortKey="Shi, Rui" sort="Shi, Rui" uniqKey="Shi R" first="Rui" last="Shi">Rui Shi</name></author><author><name sortKey="Lin, Chien Yuan" sort="Lin, Chien Yuan" uniqKey="Lin C" first="Chien-Yuan" last="Lin">Chien-Yuan Lin</name></author><author><name sortKey="Liu, Jie" sort="Liu, Jie" uniqKey="Liu J" first="Jie" last="Liu">Jie Liu</name></author><author><name sortKey="Shuford, Christopher M" sort="Shuford, Christopher M" uniqKey="Shuford C" first="Christopher M" last="Shuford">Christopher M. Shuford</name></author><author><name sortKey="Li, Quanzi" sort="Li, Quanzi" uniqKey="Li Q" first="Quanzi" last="Li">Quanzi Li</name></author><author><name sortKey="Sun, Ying Hsuan" sort="Sun, Ying Hsuan" uniqKey="Sun Y" first="Ying-Hsuan" last="Sun">Ying-Hsuan Sun</name></author><author><name sortKey="Tunlaya Anukit, Sermsawat" sort="Tunlaya Anukit, Sermsawat" uniqKey="Tunlaya Anukit S" first="Sermsawat" last="Tunlaya-Anukit">Sermsawat Tunlaya-Anukit</name></author><author><name sortKey="Williams, Cranos M" sort="Williams, Cranos M" uniqKey="Williams C" first="Cranos M" last="Williams">Cranos M. Williams</name></author><author><name sortKey="Muddiman, David C" sort="Muddiman, David C" uniqKey="Muddiman D" first="David C" last="Muddiman">David C. Muddiman</name></author><author><name sortKey="Ducoste, Joel J" sort="Ducoste, Joel J" uniqKey="Ducoste J" first="Joel J" last="Ducoste">Joel J. Ducoste</name></author><author><name sortKey="Sederoff, Ronald R" sort="Sederoff, Ronald R" uniqKey="Sederoff R" first="Ronald R" last="Sederoff">Ronald R. Sederoff</name></author><author><name sortKey="Chiang, Vincent L" sort="Chiang, Vincent L" uniqKey="Chiang V" first="Vincent L" last="Chiang">Vincent L. Chiang</name></author></analytic><series><title level="j">The Plant cell</title><idno type="eISSN">1532-298X</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Kinetics (MeSH)</term><term>Lignin (metabolism)</term><term>Mass Spectrometry (MeSH)</term><term>Plant Proteins (metabolism)</term><term>Polymorphism, Single Nucleotide (MeSH)</term><term>Populus (metabolism)</term><term>Proteome (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Cinétique (MeSH)</term><term>Lignine (métabolisme)</term><term>Polymorphisme de nucléotide simple (MeSH)</term><term>Populus (métabolisme)</term><term>Protéines végétales (métabolisme)</term><term>Protéome (MeSH)</term><term>Spectrométrie de masse (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Lignin</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Lignine</term><term>Populus</term><term>Protéines végétales</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Kinetics</term><term>Mass Spectrometry</term><term>Polymorphism, Single Nucleotide</term><term>Proteome</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Cinétique</term><term>Polymorphisme de nucléotide simple</term><term>Protéome</term><term>Spectrométrie de masse</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">We established a predictive kinetic metabolic-flux model for the 21 enzymes and 24 metabolites of the monolignol biosynthetic pathway using Populus trichocarpa secondary differentiating xylem. To establish this model, a comprehensive study was performed to obtain the reaction and inhibition kinetic parameters of all 21 enzymes based on functional recombinant proteins. A total of 104 Michaelis-Menten kinetic parameters and 85 inhibition kinetic parameters were derived from these enzymes. Through mass spectrometry, we obtained the absolute quantities of all 21 pathway enzymes in the secondary differentiating xylem. This extensive experimental data set, generated from a single tissue specialized in wood formation, was used to construct the predictive kinetic metabolic-flux model to provide a comprehensive mathematical description of the monolignol biosynthetic pathway. The model was validated using experimental data from transgenic P. trichocarpa plants. The model predicts how pathway enzymes affect lignin content and composition, explains a long-standing paradox regarding the regulation of monolignol subunit ratios in lignin, and reveals novel mechanisms involved in the regulation of lignin biosynthesis. This model provides an explanation of the effects of genetic and transgenic perturbations of the monolignol biosynthetic pathway in flowering plants. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24619611</PMID><DateCompleted><Year>2015</Year><Month>02</Month><Day>23</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1532-298X</ISSN><JournalIssue CitedMedium="Internet"><Volume>26</Volume><Issue>3</Issue><PubDate><Year>2014</Year><Month>Mar</Month></PubDate></JournalIssue><Title>The Plant cell</Title><ISOAbbreviation>Plant Cell</ISOAbbreviation></Journal><ArticleTitle>Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.</ArticleTitle><Pagination><MedlinePgn>894-914</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1105/tpc.113.120881</ELocationID><Abstract><AbstractText>We established a predictive kinetic metabolic-flux model for the 21 enzymes and 24 metabolites of the monolignol biosynthetic pathway using Populus trichocarpa secondary differentiating xylem. To establish this model, a comprehensive study was performed to obtain the reaction and inhibition kinetic parameters of all 21 enzymes based on functional recombinant proteins. A total of 104 Michaelis-Menten kinetic parameters and 85 inhibition kinetic parameters were derived from these enzymes. Through mass spectrometry, we obtained the absolute quantities of all 21 pathway enzymes in the secondary differentiating xylem. This extensive experimental data set, generated from a single tissue specialized in wood formation, was used to construct the predictive kinetic metabolic-flux model to provide a comprehensive mathematical description of the monolignol biosynthetic pathway. The model was validated using experimental data from transgenic P. trichocarpa plants. The model predicts how pathway enzymes affect lignin content and composition, explains a long-standing paradox regarding the regulation of monolignol subunit ratios in lignin, and reveals novel mechanisms involved in the regulation of lignin biosynthesis. This model provides an explanation of the effects of genetic and transgenic perturbations of the monolignol biosynthetic pathway in flowering plants. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Jack P</ForeName><Initials>JP</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Naik</LastName><ForeName>Punith P</ForeName><Initials>PP</Initials></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Hsi-Chuan</ForeName><Initials>HC</Initials></Author><Author ValidYN="Y"><LastName>Shi</LastName><ForeName>Rui</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Lin</LastName><ForeName>Chien-Yuan</ForeName><Initials>CY</Initials></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Jie</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Shuford</LastName><ForeName>Christopher M</ForeName><Initials>CM</Initials></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Quanzi</ForeName><Initials>Q</Initials></Author><Author ValidYN="Y"><LastName>Sun</LastName><ForeName>Ying-Hsuan</ForeName><Initials>YH</Initials></Author><Author ValidYN="Y"><LastName>Tunlaya-Anukit</LastName><ForeName>Sermsawat</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Williams</LastName><ForeName>Cranos M</ForeName><Initials>CM</Initials></Author><Author ValidYN="Y"><LastName>Muddiman</LastName><ForeName>David C</ForeName><Initials>DC</Initials></Author><Author ValidYN="Y"><LastName>Ducoste</LastName><ForeName>Joel J</ForeName><Initials>JJ</Initials></Author><Author ValidYN="Y"><LastName>Sederoff</LastName><ForeName>Ronald R</ForeName><Initials>RR</Initials></Author><Author ValidYN="Y"><LastName>Chiang</LastName><ForeName>Vincent L</ForeName><Initials>VL</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>03</Month><Day>11</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Cell</MedlineTA><NlmUniqueID>9208688</NlmUniqueID><ISSNLinking>1040-4651</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D020543">Proteome</NameOfSubstance></Chemical><Chemical><RegistryNumber>9005-53-2</RegistryNumber><NameOfSubstance UI="D008031">Lignin</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D007700" MajorTopicYN="N">Kinetics</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008031" MajorTopicYN="N">Lignin</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013058" MajorTopicYN="N">Mass Spectrometry</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020641" MajorTopicYN="N">Polymorphism, Single Nucleotide</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020543" MajorTopicYN="Y">Proteome</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>3</Month><Day>13</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>3</Month><Day>13</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>2</Month><Day>24</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24619611</ArticleId><ArticleId IdType="pii">tpc.113.120881</ArticleId><ArticleId IdType="doi">10.1105/tpc.113.120881</ArticleId><ArticleId IdType="pmc">PMC4001400</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Phytochemistry. 2001 Aug;57(7):1069-84</Citation><ArticleIdList><ArticleId IdType="pubmed">11430980</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 1998 Dec;10(12):2033-46</Citation><ArticleIdList><ArticleId IdType="pubmed">9836743</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Jul;153(3):1332-44</Citation><ArticleIdList><ArticleId IdType="pubmed">20472753</ArticleId></ArticleIdList></Reference><Reference><Citation>J Agric Food Chem. 2003 Oct 8;51(21):6178-83</Citation><ArticleIdList><ArticleId IdType="pubmed">14518941</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2007 Oct;226(5):1117-29</Citation><ArticleIdList><ArticleId IdType="pubmed">17594112</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 2010 Jan;51(1):144-63</Citation><ArticleIdList><ArticleId IdType="pubmed">19996151</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2011 Jul;62(11):3837-48</Citation><ArticleIdList><ArticleId IdType="pubmed">21493812</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2012 Sep;236(3):795-808</Citation><ArticleIdList><ArticleId IdType="pubmed">22628084</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 2005 Jul;46(7):1073-82</Citation><ArticleIdList><ArticleId IdType="pubmed">15870094</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2003 Jun;132(2):848-60</Citation><ArticleIdList><ArticleId IdType="pubmed">12805615</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2004 Jun;16(6):1446-65</Citation><ArticleIdList><ArticleId IdType="pubmed">15161961</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Oct;154(2):887-98</Citation><ArticleIdList><ArticleId IdType="pubmed">20639405</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):8955-60</Citation><ArticleIdList><ArticleId IdType="pubmed">10430877</ArticleId></ArticleIdList></Reference><Reference><Citation>J Plant Res. 2011 Jan;124(1):183-92</Citation><ArticleIdList><ArticleId IdType="pubmed">20509039</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 1997 Nov;9(11):1985-98</Citation><ArticleIdList><ArticleId IdType="pubmed">9401123</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Sep;154(1):311-23</Citation><ArticleIdList><ArticleId IdType="pubmed">20605915</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Prog. 2006 May-Jun;22(3):609-16</Citation><ArticleIdList><ArticleId IdType="pubmed">16739940</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1997 Jul 11;277(5323):235-9</Citation><ArticleIdList><ArticleId IdType="pubmed">9211851</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1999 Jan;119(1):101-10</Citation><ArticleIdList><ArticleId IdType="pubmed">9880351</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16573-8</Citation><ArticleIdList><ArticleId IdType="pubmed">16263933</ArticleId></ArticleIdList></Reference><Reference><Citation>Ann Bot. 2003 May;91(6):673-95</Citation><ArticleIdList><ArticleId IdType="pubmed">12714366</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Comput Biol. 2012;8(11):e1002769</Citation><ArticleIdList><ArticleId IdType="pubmed">23144605</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2009 Dec;60(5):771-82</Citation><ArticleIdList><ArticleId IdType="pubmed">19682296</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10848-53</Citation><ArticleIdList><ArticleId IdType="pubmed">23754401</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2003 Jun;217(2):218-28</Citation><ArticleIdList><ArticleId IdType="pubmed">12783329</ArticleId></ArticleIdList></Reference><Reference><Citation>Math Biosci. 2010 Nov;228(1):78-89</Citation><ArticleIdList><ArticleId IdType="pubmed">20816867</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1961 Aug 4;134(3475):305-13</Citation><ArticleIdList><ArticleId IdType="pubmed">17819301</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Comput Biol. 2011 May;7(5):e1002047</Citation><ArticleIdList><ArticleId IdType="pubmed">21625579</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Plant Biol. 2003;54:519-46</Citation><ArticleIdList><ArticleId IdType="pubmed">14503002</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 1994 Oct;26(1):61-71</Citation><ArticleIdList><ArticleId IdType="pubmed">7948906</ArticleId></ArticleIdList></Reference><Reference><Citation>Biomacromolecules. 2010 Sep 13;11(9):2359-65</Citation><ArticleIdList><ArticleId IdType="pubmed">20831275</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2011 Nov;192(3):611-25</Citation><ArticleIdList><ArticleId IdType="pubmed">21790609</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Apr;152(4):1763-71</Citation><ArticleIdList><ArticleId IdType="pubmed">20118273</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Opin Plant Biol. 1999 Apr;2(2):145-52</Citation><ArticleIdList><ArticleId IdType="pubmed">10322194</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Biotechnol. 2002 Jun;20(6):557-8</Citation><ArticleIdList><ArticleId IdType="pubmed">12042854</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2000 Nov 24;275(47):36899-909</Citation><ArticleIdList><ArticleId IdType="pubmed">10934215</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Syst Biol. 2007;1:23</Citation><ArticleIdList><ArticleId IdType="pubmed">17543097</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1994 Aug 2;91(16):7608-12</Citation><ArticleIdList><ArticleId IdType="pubmed">8052628</ArticleId></ArticleIdList></Reference><Reference><Citation>Can J Biochem Physiol. 1963 Mar;41:621-8</Citation><ArticleIdList><ArticleId IdType="pubmed">13954436</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2013 Nov;25(11):4324-41</Citation><ArticleIdList><ArticleId IdType="pubmed">24280390</ArticleId></ArticleIdList></Reference><Reference><Citation>Can J Biochem Physiol. 1958 Oct;36(10):1037-45</Citation><ArticleIdList><ArticleId IdType="pubmed">13585208</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Jan 27;311(5760):484-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16439654</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2009 Jan;149(1):370-83</Citation><ArticleIdList><ArticleId IdType="pubmed">18971431</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 1998 Jun;14(5):545-53</Citation><ArticleIdList><ArticleId IdType="pubmed">9675900</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2000 May;22(3):223-34</Citation><ArticleIdList><ArticleId IdType="pubmed">10849340</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21253-8</Citation><ArticleIdList><ArticleId IdType="pubmed">22160716</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2000 Oct;124(2):563-78</Citation><ArticleIdList><ArticleId IdType="pubmed">11027707</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2002 Dec;130(4):1675-85</Citation><ArticleIdList><ArticleId IdType="pubmed">12481050</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2013 Sep 6;341(6150):1103-6</Citation><ArticleIdList><ArticleId IdType="pubmed">23950498</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2010 Oct;22(10):3357-73</Citation><ArticleIdList><ArticleId IdType="pubmed">20952635</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2012 Jun 1;11(6):3390-404</Citation><ArticleIdList><ArticleId IdType="pubmed">22524869</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1976 Feb 20;191(4228):773-6</Citation><ArticleIdList><ArticleId IdType="pubmed">17754175</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1990 Feb;92(2):447-55</Citation><ArticleIdList><ArticleId IdType="pubmed">16667296</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2011 Aug;67(3):513-25</Citation><ArticleIdList><ArticleId IdType="pubmed">21501261</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytochemistry. 2007 Jun;68(11):1497-509</Citation><ArticleIdList><ArticleId IdType="pubmed">17509629</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Biotechnol. 2007 Jul;25(7):759-61</Citation><ArticleIdList><ArticleId IdType="pubmed">17572667</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2011 Jul;67(1):119-29</Citation><ArticleIdList><ArticleId IdType="pubmed">21426426</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 1996 Oct;37(7):957-65</Citation><ArticleIdList><ArticleId IdType="pubmed">8979396</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Soc Trans. 2007 Feb;35(Pt 1):28-32</Citation><ArticleIdList><ArticleId IdType="pubmed">17212583</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2002 Feb;128(2):428-38</Citation><ArticleIdList><ArticleId IdType="pubmed">11842147</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2001 Nov;28(3):257-70</Citation><ArticleIdList><ArticleId IdType="pubmed">11722769</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1997 Sep;115(1):41-50</Citation><ArticleIdList><ArticleId IdType="pubmed">12223790</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Biotechnol. 1999 Aug;17(8):808-12</Citation><ArticleIdList><ArticleId IdType="pubmed">10429249</ArticleId></ArticleIdList></Reference><Reference><Citation>Anal Biochem. 1976 May 7;72:248-54</Citation><ArticleIdList><ArticleId IdType="pubmed">942051</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2012 Mar;63(6):2363-75</Citation><ArticleIdList><ArticleId IdType="pubmed">22371080</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1998 May;117(1):101-12</Citation><ArticleIdList><ArticleId IdType="pubmed">9576779</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2001 Jan;13(1):73-88</Citation><ArticleIdList><ArticleId IdType="pubmed">11158530</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2012 Mar;63(6):2343-51</Citation><ArticleIdList><ArticleId IdType="pubmed">22378949</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2011;11:65</Citation><ArticleIdList><ArticleId IdType="pubmed">21492434</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2003 Nov;133(3):1051-71</Citation><ArticleIdList><ArticleId IdType="pubmed">14612585</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Oct;154(2):874-86</Citation><ArticleIdList><ArticleId IdType="pubmed">20729393</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytochemistry. 2007 Jun;68(11):1521-9</Citation><ArticleIdList><ArticleId IdType="pubmed">17466347</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2013 Mar;161(3):1501-16</Citation><ArticleIdList><ArticleId IdType="pubmed">23344904</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2011;11:158</Citation><ArticleIdList><ArticleId IdType="pubmed">22074553</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2013 Sep;238(3):487-97</Citation><ArticleIdList><ArticleId IdType="pubmed">23765265</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1998 Jun 9;95(12):6619-23</Citation><ArticleIdList><ArticleId IdType="pubmed">9618461</ArticleId></ArticleIdList></Reference><Reference><Citation>Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):295-301</Citation><ArticleIdList><ArticleId IdType="pubmed">17327666</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Oct;154(2):555-61</Citation><ArticleIdList><ArticleId IdType="pubmed">20921184</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4939-44</Citation><ArticleIdList><ArticleId IdType="pubmed">12668766</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytochemistry. 2003 Jan;62(1):53-65</Citation><ArticleIdList><ArticleId IdType="pubmed">12475619</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2012 Sep;236(3):879-85</Citation><ArticleIdList><ArticleId IdType="pubmed">22729823</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2008 Mar 18;105(11):4501-6</Citation><ArticleIdList><ArticleId IdType="pubmed">18316744</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><noCountry><name sortKey="Chen, Hsi Chuan" sort="Chen, Hsi Chuan" uniqKey="Chen H" first="Hsi-Chuan" last="Chen">Hsi-Chuan Chen</name><name sortKey="Chiang, Vincent L" sort="Chiang, Vincent L" uniqKey="Chiang V" first="Vincent L" last="Chiang">Vincent L. 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Sederoff</name><name sortKey="Shi, Rui" sort="Shi, Rui" uniqKey="Shi R" first="Rui" last="Shi">Rui Shi</name><name sortKey="Shuford, Christopher M" sort="Shuford, Christopher M" uniqKey="Shuford C" first="Christopher M" last="Shuford">Christopher M. Shuford</name><name sortKey="Sun, Ying Hsuan" sort="Sun, Ying Hsuan" uniqKey="Sun Y" first="Ying-Hsuan" last="Sun">Ying-Hsuan Sun</name><name sortKey="Tunlaya Anukit, Sermsawat" sort="Tunlaya Anukit, Sermsawat" uniqKey="Tunlaya Anukit S" first="Sermsawat" last="Tunlaya-Anukit">Sermsawat Tunlaya-Anukit</name><name sortKey="Williams, Cranos M" sort="Williams, Cranos M" uniqKey="Williams C" first="Cranos M" last="Williams">Cranos M. Williams</name></noCountry><country name="République populaire de Chine"><noRegion><name sortKey="Wang, Jack P" sort="Wang, Jack P" uniqKey="Wang J" first="Jack P" last="Wang">Jack P. Wang</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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